Any OS
From command/terminal:
java -Xmx1024m -jar weka.jar
OSX gui
From terminal:
cd /Applications/weka-3-5-7.app/Contents
open Info.plist
Under "Java" you will find an entry called "VMOptions" with the value "-Xmx256M".
Windows gui
Edit the line maxheap=1536m from C:\Program Files\Weka-3-X\RunWeka.ini
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